Can you find 95 Honda prelude cross beam bolts at NAPA or Autozone?

Possibly, but you may have better luck finding them from the dealer itself. They'll either have them in stock or they can order them for you. Incidentally, alot of parts such as bolts, suspension, and some internals can be used between 4th gen ('92-96) and 5th gen ('97-01) Preludes.